content stringlengths 35 416k | sha1 stringlengths 40 40 | id int64 0 710k |
|---|---|---|
def _checker(word: dict):
"""checks if the 'word' dictionary is fine
:param word: the node in the list of the text
:type word: dict
:return: if "f", "ref" and "sig" in word, returns true, else, returns false
:rtype: bool
"""
if "f" in word and "ref" in word and "sig" in word:
return... | ee6ec5a7ee393ddcbc97b13f6c09cdd9019fb1a6 | 709,680 |
def classified_unread_counts():
"""
Unread counts return by
helper.classify_unread_counts function.
"""
return {
'all_msg': 12,
'all_pms': 8,
'unread_topics': {
(1000, 'Some general unread topic'): 3,
(99, 'Some private unread topic'): 1
},
... | 4d5e984641de88fd497b6c78891b7e6478bb8385 | 709,681 |
def to_n_class(digit_lst, data, labels):
"""to make a subset of MNIST dataset, which has particular digits
Parameters
----------
digit_lst : list
for example, [0,1,2] or [1, 5, 8]
data : numpy.array, shape (n_samples, n_features)
labels : numpy.array or list of str
Returns
------... | 79652687ec0670ec00d67681711903ae01f4cc87 | 709,682 |
def format_value_with_percentage(original_value):
"""
Return a value in percentage format from
an input argument, the original value
"""
percentage_value = "{0:.2%}".format(original_value)
return percentage_value | 78bfb753b974bc7cbe3ac96f58ee49251063d2e7 | 709,684 |
import numpy
def get_Z_and_extent(topofile):
"""Get data from an ESRI ASCII file."""
f = open(topofile, "r")
ncols = int(f.readline().split()[1])
nrows = int(f.readline().split()[1])
xllcorner = float(f.readline().split()[1])
yllcorner = float(f.readline().split()[1])
cellsize = float(f.... | e96db5c2ae4a0d6c94654d7ad29598c3231ec186 | 709,685 |
import torch
def train_discrim(discrim, state_features, actions, optim, demostrations,
settings):
"""demostractions: [state_features|actions]
"""
criterion = torch.nn.BCELoss()
for _ in range(settings.VDB_UPDATE_NUM):
learner = discrim(torch.cat([state_features, actions], di... | 7e6c16fc396b371e92d3a04179eacb9cae63659c | 709,686 |
def max_tb(collection): # pragma: no cover
"""Returns the maximum number of TB recorded in the collection"""
max_TB = 0
for doc in collection.find({}).sort([('total_TB',-1)]).limit(1):
max_TB = doc['total_TB']
return max_TB | bde417de0b38de7a7b5e4e3db8c05e87fa6c55ca | 709,687 |
import time
def datetime_to_timestamp(d):
"""convert a datetime object to seconds since Epoch.
Args:
d: a naive datetime object in default timezone
Return:
int, timestamp in seconds
"""
return int(time.mktime(d.timetuple())) | 356ac090b0827d49e9929a7ef26041b26c6cc690 | 709,688 |
def decomposePath(path):
"""
:example:
>>> decomposePath(None)
>>> decomposePath("")
>>> decomposePath(1)
>>> decomposePath("truc")
('', 'truc', '', 'truc')
>>> decomposePath("truc.txt")
('', 'truc', 'txt', 'truc.txt')
>>> decomposePath("/home/... | 7b45cfe64f631912fc56246f404ddbea51b9f1ec | 709,689 |
def update_coverage(coverage, path, func, line, status):
"""Add to coverage the coverage status of a single line"""
coverage[path] = coverage.get(path, {})
coverage[path][func] = coverage[path].get(func, {})
coverage[path][func][line] = coverage[path][func].get(line, status)
coverage[path][func][li... | 46e5a1e5c4ebba3a9483f90ada96a0f7f94d8c1d | 709,690 |
def cross_product(v1, v2):
"""Calculate the cross product of 2 vectors as (x1 * y2 - x2 * y1)."""
return v1.x * v2.y - v2.x * v1.y | 871d803ef687bf80facf036549b4b2062f713994 | 709,691 |
def divisors(num):
"""
Takes a number and returns all divisors of the number, ordered least to greatest
:param num: int
:return: list (int)
"""
# Fill in the function and change the return statment.
return 0 | f15169b2672847294a219207f6022ad3e49338d2 | 709,692 |
def compare_distance(tree,target):
"""
Checks tree edit distance. Since every node has a unique position, we know that the node is the
same when the positions are the same. Hence, a simple method of counting the number of edits
one needs to do to create the target tree out of a given tree is equal to the number of... | 96b57e88b8e70dbb43231b56cbe7e9b7ebcfd10f | 709,693 |
def header(name='peptide'):
"""
Parameters
----------
name
Returns
-------
"""
with open('{}.pdb'.format(name), 'r') as f:
file = f.read()
model = file.find('\nMODEL')
atom = file.find('\nATOM')
if atom < 0:
raise ValueError('no ATOM entries found in... | 84e75e34771b7c395ee36611c8d055ca1fdf67dc | 709,694 |
def str2bytes(seq):
""" Converts an string to a list of integers """
return map(ord,str(seq)) | 7afe8e40cd4133c59be673b537f2717591b093cf | 709,695 |
import os
def getsize(filename):
"""Return the size of a file, reported by os.stat()."""
return os.stat(filename).st_size | f21bd048bf1fdbc80cdcbd4f14dba8f390439f74 | 709,697 |
def drop_path(input, drop_prob=0.0, training=False, scale_by_keep=True):
"""
Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
"""
if drop_prob == 0.0 or not training:
return input
keep_prob = 1 - drop_prob
shape = (input.shape[0],) + (1,) * (input.... | 289ae545fa184bb459275685d3a2894e5219db2e | 709,698 |
import os
def envi_header(inputpath):
"""
Convert a envi binary/header path to a header, handling extensions
Args:
inputpath: path to envi binary file
Returns:
str: the header file associated with the input reference.
"""
if os.path.splitext(inputpath)[-1] == '.img' or os.path... | 45df7507017676648cd4fae955da26916bbf4738 | 709,700 |
import socket
def basic_checks(server,port):
"""Perform basics checks on given host"""
sock = socket.socket(socket.AF_INET,socket.SOCK_STREAM)
# 2 seconds timeout
sock.settimeout(2)
return sock.connect_ex((server,int(port))) == 0 | 4a31521089feb2c178bb5202fa818804dfe87142 | 709,703 |
def ordToString(ordList):
"""Use this function to convert ord values to strings."""
newStrList = []
cstr = ""
for cint in ordList:
cstr += chr(cint)
if cint == 44:
newStrList.append(cstr[:-1])
cstr = ""
return newStrList | 5a836f7fe34803744de90aa2608e3d99a081c7ff | 709,704 |
import re
def _xfsdump_output(data):
"""
Parse CLI output of the xfsdump utility.
"""
out = {}
summary = []
summary_block = False
for line in [l.strip() for l in data.split("\n") if l.strip()]:
line = re.sub("^xfsdump: ", "", line)
if line.startswith("session id:"):
... | dbc7fbf9dced99b83a7dc5917c473a1dee16d749 | 709,705 |
def csstext(text: str, cls: str, span: bool=False, header: bool=False) -> str:
"""
Custom build HTML text element.
"""
if span:
tag = 'span'
elif header:
tag = 'h1'
else:
tag = 'p'
return f'<{tag} class="{cls}">{str(text)}</{tag}>' | 0833fd9d83143e09b5c234e193a8e53ef653112b | 709,706 |
def trans_exam_list_to_colum(example_list, headers=None):
"""
将example列表转换成以列表示的形式，用于适配输出附加信息
:param example_list: example 列表
:param headers: 需要的属性，默认为("question", "answer", "yes_or_no")
:return: {header1:[...]，header2:[...],...}
"""
if headers is None:
headers = ("question", "answer... | ff5a2e5f6e27ce0a32717e55ba35dbd864a11dbb | 709,707 |
def parseParams(opt):
"""Parse a set of name=value parameters in the input value.
Return list of (name,value) pairs.
Raise ValueError if a parameter is badly formatted.
"""
params = []
for nameval in opt:
try:
name, val = nameval.split("=")
except ValueError:
... | b932f74c8e5502ebdd7a8749c2de4b30921d518b | 709,708 |
def _get_name(dist):
"""Attempts to get a distribution's short name, excluding the name scope."""
return getattr(dist, 'parameters', {}).get('name', dist.name) | fd57e523c1a84a36f9ed56236e4b8db1e887575c | 709,709 |
def GenerateConfig(context):
"""Generates configuration."""
key_ring = {
'name': 'keyRing',
'type': 'gcp-types/cloudkms-v1:projects.locations.keyRings',
'properties': {
'parent': 'projects/' + context.env['project'] + '/locations/' + context.properties['region'],
'keyRingId': context.env['d... | 257b7217c1a08bba46866aff0b7faa1a03fe7fdc | 709,710 |
def _remove_none_from_post_data_additional_rules_list(json):
"""
removes hidden field value from json field "additional_rules" list,
which is there to ensure field exists for editing purposes
:param json: this is data that is going to be posted
"""
data = json
additional_rules = json.get... | c82aa568f82ba4abcb8f4e6f9c770969277d078f | 709,711 |
def NO_MERGE(writer, segments):
"""This policy does not merge any existing segments.
"""
return segments | 0742365f30d59cb219ac60483b867180bd910ba8 | 709,712 |
import os
def package_files(directory):
"""package_files
recursive method which will lets you set the
package_data parameter in the setup call.
"""
paths = []
for (path, _, filenames) in os.walk(directory):
for filename in filenames:
paths.append(os.path.join('..', path, f... | e043de9a9e8ed9092f933df00b167b092ba6abaa | 709,713 |
def transplant(root, u, v):
"""
注意， 这里要返回root， 不然修改不了
"""
if u.parent == None:
root = v
elif u.parent.left == u:
u.parent.left = v
else:
u.parent.right = v
if v:
v.parent = u.parent
return root | cadf0433399e428596d1d0d4ab200e4d79285d21 | 709,714 |
import subprocess
def pr_branches() -> list[str]:
"""List of branches that start with 'pr-'"""
out = subprocess.run(
[
"git",
"for-each-ref",
"--shell",
'--format="%(refname:strip=3)"',
"refs/remotes/origin/pr-*",
],
capture_o... | f144d2546ef59cb392f4ad1226c2246384bdfd99 | 709,715 |
from typing import Union
def parse_boolean(val: str) -> Union[str, bool]:
"""Try to parse a string into boolean.
The string is returned as-is if it does not look like a boolean value.
"""
val = val.lower()
if val in ('y', 'yes', 't', 'true', 'on', '1'):
return True
if val in ('n', 'no... | e2cbda5a849e1166e0f2a3953220c93d1f3ba119 | 709,716 |
def supports_color(stream) -> bool: # type: ignore
"""Determine whether an output stream (e.g. stdout/stderr) supports displaying colored text.
A stream that is redirected to a file does not support color.
"""
return stream.isatty() and hasattr(stream, "isatty") | 4a427d6725206ef33b3f4da0ace6f2d6c3db78a9 | 709,717 |
import os
def get_current_version_name():
"""Returns the version of the current instance.
If this is version "v1" of module "module5" for app "my-app", this function
will return "v1".
"""
return os.environ['CURRENT_VERSION_ID'].split('.')[0] | cbd7fdbb9af4990e32130f2aa3af0cfe8bf59816 | 709,718 |
import re
def safe_htcondor_attribute(attribute: str) -> str:
"""Convert input attribute name into a valid HTCondor attribute name
HTCondor ClassAd attribute names consist only of alphanumeric characters or
underscores. It is not clearly documented, but the alphanumeric characters
are probably restr... | 7a4dda539b2379120e68737d72a80226c45f5602 | 709,720 |
def make_csv(headers, data):
"""
Creates a CSV given a set of headers and a list of database query results
:param headers: A list containg the first row of the CSV
:param data: The list of query results from the Database
:returns: A str containing a csv of the query results
"""
# Create a list where each entr... | 5101d53de8dd09d8ebe743d77d71bff9aeb26334 | 709,721 |
from typing import Tuple
def extract_value_from_config(
config: dict,
keys: Tuple[str, ...],
):
"""
Traverse a config dictionary to get some hyper-parameter's value.
Parameters
----------
config
A config dictionary.
keys
The possible names of a hyper-parameter.... | d545d4c9298c74776ec52fb6b2c8d54d0e653489 | 709,722 |
import numpy
def boundaryStats(a):
"""
Returns the minimum and maximum values of a only on the boundaries of the array.
"""
amin = numpy.amin(a[0,:])
amin = min(amin, numpy.amin(a[1:,-1]))
amin = min(amin, numpy.amin(a[-1,:-1]))
amin = min(amin, numpy.amin(a[1:-1,0]))
amax = numpy.amax(a[0,:])
amax ... | 6c007c6cf2c7c5774ca74365be8f63094864d962 | 709,723 |
def vision_matched_template_get_pose(template_match):
"""
Get the pose of a previously detected template match. Use list operations
to get specific entries, otherwise returns value of first entry.
Parameters:
template_match (List[MatchedTemplate3D] or MatchedTemplate3D): The template match(s)
... | b854da7a085934f4f3aba510e76852fb8c0a440a | 709,724 |
def no_zero(t):
"""
This function replaces all zeros in a tensor with ones.
This allows us to take the logarithm and then sum over all values in the matrix.
Args:
t: tensor to be replaced
returns:
t: tensor with ones instead of zeros.
"""
t[t==0] = 1.
return t | 8119d1859dc8b248f5bb09b7cc0fc3b492d9b7bd | 709,726 |
def get_vocabulary(query_tree):
"""Extracts the normalized search terms from the leaf nodes of a parsed
query to construct the vocabulary for the text vectorization.
Arguments
---------
query_tree: pythonds.trees.BinaryTree
The binary tree object representing a parsed search query. Each lea... | bd03f4894cd3f9a7964196bfb163335f84a048d7 | 709,728 |
def find_point_in_section_list(point, section_list):
"""Returns the start of the section the given point belongs to.
The given list is assumed to contain start points of consecutive
sections, except for the final point, assumed to be the end point of the
last section. For example, the list [5, 8, 30, 3... | 47d5cda15b140ba8505ee658fd46ab090b2fda8a | 709,729 |
import os
import types
def generate_module(file_allocator, name):
"""
Generate an in-memory module from a generated Python implementation.
"""
assert name in file_allocator.allocated_files
f = file_allocator.allocated_files[name]
f.seek(0)
data = f.read()
modname, _ = os.path.splitex... | beab4cdf12fcdfeacef9f8a8607e995b771d6012 | 709,730 |
def choose(population, sample):
"""
Returns ``population`` choose ``sample``, given
by: n! / k!(n-k)!, where n == ``population`` and
k == ``sample``.
"""
if sample > population:
return 0
s = max(sample, population - sample)
assert s <= population
assert population > -1
i... | 659eac683cae737888df74c0db21aa3ece746b33 | 709,731 |
def eea(m, n):
"""
Compute numbers a, b such that a*m + b*n = gcd(m, n)
using the Extended Euclidean algorithm.
"""
p, q, r, s = 1, 0, 0, 1
while n != 0:
k = m // n
m, n, p, q, r, s = n, m - k*n, q, p - k*q, s, r - k*s
return (p, r) | 56e1c59ac3a51e26d416fe5c65cf6612dbe56b8c | 709,733 |
import csv
def parse_kinetics_splits(level):
"""Parse Kinetics-400 dataset into "train", "val", "test" splits.
Args:
level (int): Directory level of data. 1 for the single-level directory,
2 for the two-level directory.
Returns:
list: "train", "val", "test" splits of Kinetics... | ee2521919f9f9c3f499cd28bc6003528eb402d2b | 709,736 |
import uuid
def ticket() -> str:
"""生成请求饿百接口所需的ticket参数"""
return str(uuid.uuid1()).upper() | aaf1135d6ef5e61aa65960c5c38007848cbd0b17 | 709,737 |
def get_clients( wlc, *vargs, **kvargs ):
"""
create a single dictionary containing information
about all associated stations.
"""
rsp = wlc.rpc.get_stat_user_session_status()
ret_data = {}
for session in rsp.findall('.//USER-SESSION-STATUS'):
locs... | c4ab5941033632d7f2b95bc23878f0464d12adb7 | 709,738 |
def maximum_value(tab):
"""
brief: return maximum value of the list
args:
tab: a list of numeric value expects at leas one positive value
return:
the max value of the list
the index of the max value
raises:
ValueError if expected a list as input
ValueError if no positive value found
"""
if not(isinstan... | 1c31daf3a953a9d781bc48378ef53323313dc22a | 709,739 |
import math
def dsh(
incidence1: float, solar_az1: float, incidence2: float, solar_az2: float
):
"""Returns the Shadow-Tip Distance (dsh) as detailed in
Becker et al.(2015).
The input angles are assumed to be in radians.
This is defined as the distance between the tips of the shadows
in the ... | 5aef1c9d7ffeb3e8534568a53cf537d26d97324a | 709,740 |
def instantiate(class_name, *args, **kwargs):
"""Helper to dynamically instantiate a class from a name."""
split_name = class_name.split(".")
module_name = split_name[0]
class_name = ".".join(split_name[1:])
module = __import__(module_name)
class_ = getattr(module, class_name)
return class_... | d5906c835de9c2e86fbe3c15a9236662d6c7815d | 709,741 |
import six
def _stringcoll(coll):
"""
Predicate function to determine whether COLL is a non-empty
collection (list/tuple) containing only strings.
Arguments:
- `coll`:*
Return: bool
Exceptions: None
"""
if isinstance(coll, (list, tuple)) and coll:
return len([s for s in c... | 9490a973900e230f70fea112f250cfe29be3a8bc | 709,742 |
def __check_complete_list(list_, nb_max, def_value):
"""
make sure the list is long enough
complete with default value if not
:param list_: list to check
:param nb_max: maximum length of the list
:param def_value: if list too small,
completes it with this value
:return: boolean,... | 9d439cd3eeea04e7a3e0e59aa4fe0bbb875bdfe4 | 709,743 |
def verify_parentheses(parentheses_string: str) -> bool:
"""Takes input string of only '{},[],()' and evaluates to True if valid."""
open_parentheses = []
valid_parentheses_set = {'(', ')', '[', ']', '{', '}'}
parentheses_pairs = {
')' : '(',
']' : '[',
'}' : '{'
}
if le... | 2e2c07314d474b582f12af8cf53a311c0fa323c1 | 709,745 |
import re
def compute_dict(file_path):
"""Computes the dict for a file whose path is file_path"""
file_dict = {}
with open(file_path, encoding = 'utf8') as fin:
for line in fin:
line = line.strip()
txt = re.sub('([^a-zA-Z0-9\s]+)',' \\1 ',line)
txt = re.sub('([\... | 821e29181aad781279b27174be0fd7458b60481f | 709,747 |
def isMatch(s, p):
""" Perform regular simple expression matching
Given an input string s and a pattern p, run regular expression
matching with support for '.' and '*'.
Parameters
----------
s : str
The string to match.
p : str
The pattern to match.
Returns
-------... | 92cd3171afeb73c6a58bbcd3d3ea6d707401cb09 | 709,748 |
from typing import Optional
def convert_postgres_array_as_string_to_list(array_as_string: str) -> Optional[list]:
"""
Postgres arrays are stored in CSVs as strings. Elasticsearch is able to handle lists of items, but needs to
be passed a list instead of a string. In the case of an empty array, ret... | cc64fe8e0cc765624f80abc3900985a443f76792 | 709,749 |
def add_prefix(key):
"""Dummy key_function for testing index code."""
return "id_" + key | 96dda0bd57b4eb89f17c8bb69ad48e3e1675a470 | 709,750 |
def binaryToString(binary):
"""
从二进制字符串转为 UTF-8 字符串
"""
index = 0
string = []
rec = lambda x, i: x[2:8] + (rec(x[8:], i - 1) if i > 1 else '') if x else ''
fun = lambda x, i: x[i + 1:8] + rec(x[8:], i - 1)
while index + 1 < len(binary):
chartype = binary[index:].index('0') # 存放字... | 2044109d573abe7c9428b64b289b5aa82ec4d624 | 709,751 |
import functools
import logging
def disable_log_warning(fun):
"""Temporarily set FTP server's logging level to ERROR."""
@functools.wraps(fun)
def wrapper(self, *args, **kwargs):
logger = logging.getLogger('pyftpdlib')
level = logger.getEffectiveLevel()
logger.setLevel(logging.ERRO... | 6990a2a1a60ea5a24e4d3ac5c5e7fbf443825e48 | 709,752 |
import json
import operator
def my_subs_helper(s):
"""Helper function to handle badly formed JSON stored in the database"""
try:
return {'time_created':s.time_created, 'json_obj':sorted(json.loads(s.json_data).iteritems(), key=operator.itemgetter(0)), 'plain_json_obj':json.dumps(json.loads(s.json_data... | 4b649d865c3a99f89111baa694df4902e65243e6 | 709,753 |
def add_to_codetree(tword,codetree,freq=1):
""" Adds one tuple-word to tree structure - one node per symbol
word end in the tree characterized by node[0]>0
"""
unique=0
for pos in range(len(tword)):
s = tword[pos]
if s not in codetree:
codetree[s] = [0,{}]
... | e92a48f112e7a774bed3b125509f7f64dce0a7ec | 709,754 |
def remove_from_dict(obj, keys=list(), keep_keys=True):
""" Prune a class or dictionary of all but keys (keep_keys=True).
Prune a class or dictionary of specified keys.(keep_keys=False).
"""
if type(obj) == dict:
items = list(obj.items())
elif isinstance(obj, dict):
items = list(... | b1d9a2bd17269e079ce136cc464060fc47fe5906 | 709,755 |
def stringToTupleOfFloats(s):
"""
Converts s to a tuple
@param s: string
@return: tuple represented by s
"""
ans = []
for i in s.strip("()").split(","):
if i.strip() != "":
if i == "null":
ans.append(None)
else:
ans.append(float... | 7eec23232f884035b12c6498f1e68616e4580878 | 709,756 |
import sys
def factorial(x):
"""factorial(x) -> Integral
"Find x!. Raise a ValueError if x is negative or non-integral."""
if isinstance(x, float):
fl = int(x)
if fl != x:
raise ValueError("float arguments must be integral")
x = fl
if x > sys.maxsize:
raise... | 664cc8e0e215f089bbc57fec68553d788305e4c0 | 709,757 |
import json
def read_json(file_name):
"""Read json from file."""
with open(file_name) as f:
return json.load(f) | 2eccab7dddb1c1038de737879c465f293a00e5de | 709,758 |
def _decode_end(_fp):
"""Decode the end tag, which has no data in the file, returning 0.
:type _fp: A binary `file object`
:rtype: int
"""
return 0 | 5e8da3585dda0b9c3c7cd428b7e1606e585e15c6 | 709,759 |
def get_camelcase_name_chunks(name):
"""
Given a name, get its parts.
E.g: maxCount -> ["max", "count"]
"""
out = []
out_str = ""
for c in name:
if c.isupper():
if out_str:
out.append(out_str)
out_str = c.lower()
else:
out_s... | 134a8b1d98af35f185b37c999fbf499d18bf76c5 | 709,760 |
def orb_scf_input(sdmc):
""" find the scf inputs used to generate sdmc """
myinputs = None # this is the goal
sdep = 'dependencies' # string representation of the dependencies entry
# step 1: find the p2q simulation id
p2q_id = None
for key in sdmc[sdep].keys():
if sdmc[sdep][key].result_names[0] == 'o... | c319693e9673edf540615025baf5b5199c5e27a3 | 709,762 |
def is_success(code):
""" Returns the expected response codes for HTTP GET requests
:param code: HTTP response codes
:type code: int
"""
if (200 <= code < 300) or code in [404, 500]:
return True
return False | fa502b4989d80edc6e1c6c717b6fe1347f99990d | 709,763 |
import json
def get_node_to_srn_mapping(match_config_filename):
"""
Returns the node-to-srn map from match_conf.json
"""
with open(match_config_filename) as config_file:
config_json = json.loads(config_file.read())
if "node_to_srn_mapping" in config_json:
return config_j... | 37bf2f266f4e5163cc4d6e9290a8eaf17e220cd3 | 709,765 |
def nest_dictionary(flat_dict, separator):
""" Nests a given flat dictionary.
Nested keys are created by splitting given keys around the `separator`.
"""
nested_dict = {}
for key, val in flat_dict.items():
split_key = key.split(separator)
act_dict = nested_dict
final_key = ... | f5b8649d916055fa5911fd1f80a8532e5dbee274 | 709,766 |
def list_a_minus_b(list1, list2):
"""Given two lists, A and B, returns A-B."""
return filter(lambda x: x not in list2, list1) | 8fbac6452077ef7cf73e0625303822a35d0869c3 | 709,767 |
def gt_dosage(gt):
"""Convert unphased genotype to dosage"""
x = gt.split(b'/')
return int(x[0])+int(x[1]) | 819fc9beb834f57e44bcb0ac3e1d3c664c7efd42 | 709,768 |
import csv
import re
import sys
def read_mapping_file(map_file):
"""
Mappings are simply a CSV file with three columns.
The first is a string to be matched against an entry description.
The second is the payee against which such entries should be posted.
The third is the account against which such... | e72ceb08daac0a12a426062f95cfa06776cfdedd | 709,769 |
import os
def GetEnvironFallback(var_list, default):
"""Look up a key in the environment, with fallback to secondary keys
and finally falling back to a default value."""
for var in var_list:
if var in os.environ:
return os.environ[var]
return default | 1b9cad3c46264c089f250ccb19119cff8cacd0d1 | 709,770 |
def task_migrate():
"""Create django databases"""
return {
'actions': ['''cd CCwebsite && python3 manage.py migrate''']
} | d0d146c2e628abbe33714ae0ff6a546aab9842cc | 709,771 |
import os
def print_header(args, argv, preamble='CIFAR10', printfn=print,
log=open(os.devnull, 'w'),
first=('model','dataset','epoch','batchsize','resume','out')):
""" Prints the arguments and header, and returns a logging print function """
def logprint(*args, file... | c1213f441696dbabedafe9888a681cf64bab4249 | 709,772 |
def tempo_para_percorrer_uma_distancia(distancia, velocidade):
""" Recebe uma distância e a velocidade de movimentação, e retorna
as horas que seriam gastas para percorrer em linha reta"""
horas = distancia / velocidade
return round(horas,2) | e7754e87e010988284a6f89497bb1c5582ea0e85 | 709,773 |
def find_last_index(l, x):
"""Returns the last index of element x within the list l"""
for idx in reversed(range(len(l))):
if l[idx] == x:
return idx
raise ValueError("'{}' is not in list".format(x)) | f787b26dd6c06507380bf2e336a58887d1f1f7ea | 709,774 |
def _CheckUploadStatus(status_code):
"""Validates that HTTP status for upload is 2xx."""
return status_code / 100 == 2 | d799797af012e46945cf413ff54d2ee946d364ba | 709,776 |
def identifyEntity(tweet, entities):
"""
Identify the target entity of the tweet from the list of entities
:param tweet:
:param entities:
:return:
"""
best_score = 0 # best score over all entities
targetEntity = "" # the entity corresponding to the best score
for word in tweet:
... | d6825dfddf01706ee266e0f1c82128a42bcb8554 | 709,777 |
def _apply_D_loss(scores_fake, scores_real, loss_func):
"""Compute Discriminator losses and normalize loss values
Arguments
---------
scores_fake : list
discriminator scores of generated waveforms
scores_real : list
discriminator scores of groundtruth waveforms
loss_func : objec... | 9432962af57193c07a268d00a3f1f01d372cb6a0 | 709,778 |
import random
def pick_op(r, maxr, w, maxw):
"""Choose a read or a write operation"""
if r == maxr or random.random() >= float(w) / maxw:
return "write"
else:
return "read" | a45f53bf12538412b46f78e2c076966c26cf61ac | 709,779 |
import os
def isvalid(save_path, file):
""" Returns true if the file described by the parameters is a file with
the appropriate file extension. """
return os.path.isfile(os.path.join(save_path, file)) and \
str(file).endswith('.meta') | 55f76212eaaae3be6706a01f3f28d24005d28f75 | 709,781 |
def min_index(array, i, j):
"""Pomocna funkce pro razeni vyberem. Vrati index nejmensiho prvku
v poli 'array' mezi 'i' a 'j'-1.
"""
index = i
for k in range(i, j):
if array[k] < array[index]:
index = k
return index | 4c59362fac2e918ba5a0dfe9f6f1670b3e95d68c | 709,782 |
def average_precision(gt, pred):
"""
Computes the average precision.
This function computes the average prescision at k between two lists of
items.
Parameters
----------
gt: set
A set of ground-truth elements (order doesn't matter)
pred: list
A list of predicted elements (order does mat... | ca265471d073b6a0c7543e24ef0ba4f872737997 | 709,784 |
import math
def rotate_coo(x, y, phi):
"""Rotate the coordinates in the *.coo files for data sets
containing images at different PAs.
"""
# Rotate around center of image, and keep origin at center
xin = 512.
yin = 512.
xout = 512.
yout = 512.
cos = math.cos(math.radians(phi))
... | a57a4c36119e96d757bd23f28a0790f6d68661fc | 709,785 |
def ip_block_array():
"""
Return an ipBlock array instance fixture
"""
return ['10.0.0.1', '10.0.0.2', '10.0.0.3'] | c74756f34b97d2550cb238bd63e0c9505f3935d3 | 709,786 |
import os
def _find_modules_and_directories(top_level_directory):
"""
Recursive helper function to find all python files included in top level
package. This will recurse down the directory paths of any package to find
all modules and subpackages in order to create an exhaustive list of all
python ... | 2aecb5974f83ce01b2a8e4a6fb8313399756c1d4 | 709,787 |
import math
import torch
def log_density_gaussian(x, mu, logvar):
"""Calculates log density of a gaussian.
Parameters
----------
mu: torch.Tensor or np.ndarray or float
Mean.
logvar: torch.Tensor or np.ndarray or float
Log variance.
"""
normalization = - 0.5 * (math.log(2... | 3fdc751aa58b3ec82e1aa454f593879d5da4c310 | 709,788 |
def split_page(array, limit, index):
"""
按限制要求分割数组，返回下标所指向的页面
:param array: 需要分割的数组
:param limit: 每个数组的大小
:param index: 需要返回的分割后的数组
:return: 数组
"""
end = index * limit
start = end - limit
return array[start:end] | ecce83d6e2e09d47e124536f294ece1e1631e6b6 | 709,789 |
def Flatten(matrix):
"""Flattens a 2d array 'matrix' to an array."""
array = []
for a in matrix:
array += a
return array | 00389b4dd295274d8081331d6ae78f233f0b5b59 | 709,790 |
def get_ws_param(args, attr):
"""get the corresponding warm start parameter, if it is not exists, use the value of the general parameter"""
assert hasattr(args, attr), 'Invalid warm start parameter!'
val = getattr(args, attr)
if hasattr(args, 'ws_' + attr):
ws_val = getattr(args, 'ws_' + attr)
... | ea1d762654153602f8ad54048e54995c26304e40 | 709,791 |
def escape_name(name):
"""Escape sensor and request names to be valid Python identifiers."""
return name.replace('.', '_').replace('-', '_') | 856b8fe709e216e027f5ab085dcab91604c93c2e | 709,792 |
def multiset_counter(mset):
"""
Return the sum of occurences of elements present in a token ids multiset,
aka. the multiset cardinality.
"""
return sum(mset.values()) | 36885abd5bf666aa6c77a262a647c227e46d2e88 | 709,793 |
def lengthenFEN(fen):
"""Lengthen FEN to 71-character form (ex. '3p2Q' becomes '111p11Q')"""
return fen.replace('8','11111111').replace('7','1111111') \
.replace('6','111111').replace('5','11111') \
.replace('4','1111').replace('3','111').replace('2','11') | f49cdf8ad6919fbaaad1abc83e24b1a33a3ed3f8 | 709,794 |
import os
import pickle
def load_flags(save_dir, save_file="flags.obj"):
"""
This function inflate the pickled object to flags object for reuse, typically during evaluation (after training)
:param save_dir: The place where the obj is located
:param save_file: The file name of the file, usually flags.o... | 44cc70f185645799fdfd81c8806f3d3f8585fef4 | 709,795 |
def pancakeSort(self, A):
# ! 这个方法实际上是在每轮循环中寻找最大的那个数，使其在正确的位置
"""
:type A: List[int]
:rtype: List[int]
"""
bucket = sorted(A)
ans = []
for k in range(len(A),0,-1):
i = A.index(bucket.pop())+1
ans += [i, k]
A = A[i:k][::-1] + A[:i] + A[k:]
print(A)
ret... | 35d358c6631f5cc708232f67a3e55d685116dff8 | 709,797 |
def includeme(config):
"""
Get build Git repository directory and make it accessible
to all requests generated via Cornice
"""
# Make DB connection accessible as a request property
def _get_repos(request):
_settings = request.registry.settings
repo_dir = _settings['repo_basedir'... | f2d73eb01b616f79059f4001c7b3faad67f48cd2 | 709,798 |
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