| | from logging import BASIC_FORMAT |
| | from utils import * |
| | from simulator import * |
| | from networkx.algorithms.tree.branchings import Edmonds |
| | from broadcast import BroadCastTopology |
| | from pathlib import Path |
| | import graphviz as gv |
| | import networkx as nx |
| | import subprocess |
| | import argparse |
| | import json |
| | import sys |
| | import os |
| |
|
| |
|
| | def networkx_to_graphviz(g, src, dsts, label="partitions"): |
| | """Convert `networkx` graph `g` to `graphviz.Digraph`. |
| | |
| | @type g: `networkx.Graph` or `networkx.DiGraph` |
| | @rtype: `graphviz.Digraph` |
| | """ |
| | if g.is_directed(): |
| | h = gv.Digraph() |
| | else: |
| | h = gv.Graph() |
| | for u, d in g.nodes(data=True): |
| | |
| | if u.split(",")[0] == src: |
| | h.node(str(u.replace(":", " ")), fillcolor="red", style="filled") |
| | elif u.split(",")[0] in dsts: |
| | h.node(str(u.replace(":", " ")), fillcolor="green", style="filled") |
| | h.node(str(u.replace(":", " "))) |
| | for u, v, d in g.edges(data=True): |
| | |
| | h.edge(str(u.replace(":", " ")), str(v.replace(":", " ")), label=str(d[label])) |
| | return h |
| |
|
| |
|
| | def N_dijkstra(src, dsts, G, num_partitions): |
| | h = G.copy() |
| | h.remove_edges_from(list(h.in_edges(source_node)) + list(nx.selfloop_edges(h))) |
| | bc_topology = BroadCastTopology(src, dsts, num_partitions) |
| |
|
| | for dst in dsts: |
| | path = nx.dijkstra_path(h, src, dst, weight="cost") |
| | for i in range(0, len(path) - 1): |
| | s, t = path[i], path[i + 1] |
| | for j in range(bc_topology.num_partitions): |
| | bc_topology.append_dst_partition_path(dst, j, [s, t, G[s][t]]) |
| |
|
| | return bc_topology |
| |
|
| |
|
| | def N_direct(src, dsts, G, num_partitions): |
| | bc_topology = BroadCastTopology(src, dsts, num_partitions) |
| |
|
| | for dst in dsts: |
| | edge = G[src][dst] |
| | for j in range(bc_topology.num_partitions): |
| | bc_topology.set_dst_partition_paths(dst, j, [[src, dst, edge]]) |
| |
|
| | return bc_topology |
| |
|
| |
|
| | def MDST(src, dsts, G, num_partitions): |
| | |
| | h = G.copy() |
| | h.remove_edges_from(list(h.in_edges(src)) + list(nx.selfloop_edges(h))) |
| | DST_graph = Edmonds(h.subgraph([src] + dsts)) |
| | opt_DST = DST_graph.find_optimum(attr="cost", kind="min", preserve_attrs=True, style="arborescence") |
| | bc_topology = BroadCastTopology(src, dsts, num_partitions) |
| |
|
| | |
| | MDST_graph = nx.DiGraph() |
| | for edge in list(opt_DST.edges()): |
| | s, d = edge[0], edge[1] |
| | MDST_graph.add_edge(s, d, **G[s][d]) |
| |
|
| | return append_src_dst_paths(src, dsts, MDST_graph, bc_topology), MDST_graph |
| |
|
| |
|
| | def MULTI_MDST(src, dsts, G, num_partitions): |
| | |
| | h = G.copy() |
| | MDST_graphs = [] |
| | while len(list(h.edges())) > 0: |
| | _, MDST_graph = MDST(src, dsts, h, 1) |
| | print("MDST graph: ", MDST_graph.edges.data()) |
| | MDST_graphs.append(MDST_graph) |
| | h.remove_edges_from(list(MDST_graph.edges())) |
| |
|
| | print("Number of MDSTs: ", len(MDST_graphs)) |
| |
|
| |
|
| | def Min_Steiner_Tree(src, dsts, G, num_partitions, hop_limit=3000): |
| | |
| | source_v, dest_v = src, dsts |
| |
|
| | h = G.copy() |
| | h.remove_edges_from(list(h.in_edges(source_v)) + list(nx.selfloop_edges(h))) |
| |
|
| | nodes, edges = list(h.nodes), list(h.edges) |
| | num_nodes, num_edges = len(nodes), len(edges) |
| | id_to_name = {nodes.index(n) + 1: n for n in nodes} |
| |
|
| | config_loc = "write.set" |
| | write_loc = "test.stplog" |
| | param_loc = "test.stp" |
| |
|
| | with open(config_loc, "w") as f: |
| | f.write('stp/logfile = "use_probname"') |
| | f.close() |
| |
|
| | command = " ~/Documents/Packages/scipoptsuite-8.0.2/build/bin/applications/scipstp " |
| | command += f"-f {param_loc} -s {config_loc} -l {write_loc}" |
| |
|
| | def construct_stp(): |
| | section_begin = '33D32945 STP File, STP Format Version 1.0\n\nSECTION Comment\nName "Relay: cloud regions"\nCreator "S. Liu"\n' |
| | section_begin += f'Remark "Cloud region problem adapted from relay"\nEND\n\nSECTION Graph\n' |
| | section_begin += f"Nodes {num_nodes}\nEdges {num_edges}\nHopLimit {hop_limit}\n" |
| |
|
| | Edge_info = [] |
| | cnt = 0 |
| | for edge in edges: |
| | s, d = nodes.index(edge[0]) + 1, nodes.index(edge[1]) + 1 |
| | cost = h[edge[0]][edge[1]]["cost"] |
| | cnt += 1 |
| | Edge_info.append(f"A {s} {d} {cost}\n") |
| | if cnt == num_edges: |
| | Edge_info.append("END\n") |
| |
|
| | s = nodes.index(source_v) + 1 |
| | v = [nodes.index(i) + 1 for i in dest_v] |
| | terminal_info = [f"T {i}\n" for i in v] |
| | terminal_info.append("END\n\nEOF") |
| | section_terminal = f"""\nSECTION Terminals\nRoot {s}\nTerminals {len(dest_v)}\n""" |
| |
|
| | with open(param_loc, "w") as f: |
| | f.write(section_begin) |
| | for edge in Edge_info: |
| | f.write(edge.lstrip()) |
| | f.write(section_terminal) |
| | for t in terminal_info: |
| | f.write(t) |
| | f.close() |
| | return |
| |
|
| | def read_result(loc): |
| | di_stree_graph = nx.DiGraph() |
| | with open(loc, "r") as f: |
| | lines = f.readlines() |
| | for line in lines: |
| | if line.startswith("E") and len(line.split()) == 3: |
| | l = line.split() |
| | src_r, dst_r = id_to_name[int(l[1])], id_to_name[int(l[2])] |
| | di_stree_graph.add_edge(src_r, dst_r, **G[src_r][dst_r]) |
| |
|
| | |
| | return di_stree_graph |
| |
|
| | construct_stp() |
| | process = subprocess.Popen(command, shell=True) |
| | process.wait() |
| | solution_graph = read_result(loc=write_loc) |
| |
|
| | print( |
| | f"Number of overlays added: {len(solution_graph.nodes) - (1 + len(dsts))}, {[node for node in solution_graph.nodes if node not in [src]+dsts]}" |
| | ) |
| | bc_topology = BroadCastTopology(src, dsts, num_partitions) |
| |
|
| | os.remove(config_loc) |
| | os.remove(write_loc) |
| | os.remove(param_loc) |
| |
|
| | return append_src_dst_paths(src, dsts, solution_graph, bc_topology) |
| |
|
| |
|
| | if __name__ == "__main__": |
| | parser = argparse.ArgumentParser() |
| | parser.add_argument("jsonfile", help="input json file") |
| | parser.add_argument("-a", "--algo", type=str, nargs="?", const="") |
| | parser.add_argument("-n", "--num-vms", type=int, nargs="?", const="") |
| | args = vars(parser.parse_args()) |
| | print("Args:", args) |
| |
|
| | print(f"\n==============> Baseline generation") |
| | with open(args["jsonfile"], "r") as f: |
| | config_name = args["jsonfile"].split("/")[1].split(".")[0] |
| | config = json.loads(f.read()) |
| |
|
| | |
| | |
| | G = make_nx_graph(num_vms=int(args["num_vms"])) |
| |
|
| | |
| | source_node = config["source_node"] |
| | terminal_nodes = config["dest_nodes"] |
| |
|
| | print(f"source_v = '{source_node}'") |
| | print(f"dest_v = {terminal_nodes}") |
| | |
| | if args["algo"] is None: |
| | algorithms = [ |
| | "Ndirect", |
| | "MDST", |
| | |
| | ] |
| | else: |
| | algorithms = [args["algo"]] |
| | print(f"Algorithms: {algorithms}\n") |
| |
|
| | directory = f"paths/{config_name}" |
| | if not os.path.exists(directory): |
| | Path(directory).mkdir(parents=True, exist_ok=True) |
| |
|
| | num_partitions = config["num_partitions"] |
| | for algo in algorithms: |
| | outf = f"{directory}/{algo}.json" |
| | print(f"Generate {algo} paths into {outf}") |
| | if algo == "Ndirect": |
| | bc_t = N_direct(source_node, terminal_nodes, G, num_partitions) |
| | elif algo == "MDST": |
| | bc_t, mdgraph = MDST(source_node, terminal_nodes, G, num_partitions) |
| | elif algo == "MULTI-MDST": |
| | bc_t = MULTI_MDST(source_node, terminal_nodes, G, num_partitions) |
| | elif algo == "HST": |
| | bc_t = Min_Steiner_Tree(source_node, terminal_nodes, G, num_partitions) |
| | elif algo == "Ndijkstra": |
| | bc_t = N_dijkstra(source_node, terminal_nodes, G, num_partitions) |
| | else: |
| | raise NotImplementedError(algo) |
| |
|
| | bc_t.set_num_partitions(config["num_partitions"]) |
| |
|
| | with open(outf, "w") as outfile: |
| | outfile.write( |
| | json.dumps( |
| | { |
| | "algo": algo, |
| | "source_node": bc_t.src, |
| | "terminal_nodes": bc_t.dsts, |
| | "num_partitions": bc_t.num_partitions, |
| | "generated_path": bc_t.paths, |
| | } |
| | ) |
| | ) |
| |
|
| | |
| | input_dir = "paths" |
| | output_dir = "evals" |
| | with open(sys.argv[1], "r") as f: |
| | config_name = sys.argv[1].split("/")[1].split(".")[0] |
| | config = json.loads(f.read()) |
| |
|
| | input_dir += f"/{config_name}" |
| | output_dir += f"/{config_name}" |
| | if not os.path.exists(output_dir): |
| | Path(output_dir).mkdir(parents=True, exist_ok=True) |
| |
|
| | simulator = BCSimulator(int(args["num_vms"]), output_dir) |
| | for algo in algorithms: |
| | path = f"{input_dir}/{algo}.json" |
| | simulator.evaluate_path(path, config) |
| |
|
| | |
| | |
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